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Atomic-orbital Based Ab-initio Computation at UStc
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output_mulliken.h
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1#ifndef OUTPUT_MULLIKEN_H
2#define OUTPUT_MULLIKEN_H
12#include "source_estate/module_dm/density_matrix.h" // mohan add 2025-11-04
13
14#include <map>
15#include <vector>
16
17namespace ModuleIO
18{
19
21template <typename TK>
23{
24 public:
27 Output_DMK<TK>* output_dmk,
28 Parallel_Orbitals* ParaV,
29 CellIndex* cell_index,
30 const std::vector<int>& isk,
31 int nspin);
33 void write(int istep, std::string out_dir);
35 void print_atom_mag(const std::vector<std::vector<double>>& atom_chg, std::ostream& os);
37 std::vector<double> get_tot_chg();
39 std::vector<std::vector<double>> get_atom_chg();
41 std::map<std::vector<int>, double> get_orb_chg();
43 std::vector<std::vector<double>> get_atom_mulliken(std::vector<std::vector<double>>& atom_chg);
44
45 private:
46 /******************************************************************
47 * private functions
48 *******************************************************************/
50 void write_mulliken_nspin1(int istep,
51 const std::vector<double>& tot_chg,
52 const std::vector<std::vector<double>>& atom_chg,
53 std::map<std::vector<int>, double> orb_chg,
54 std::ofstream& os);
56 void write_mulliken_nspin2(int istep,
57 const std::vector<double>& tot_chg,
58 const std::vector<std::vector<double>>& atom_chg,
59 std::map<std::vector<int>, double> orb_chg,
60 std::ofstream& os);
62 void write_mulliken_nspin4(int istep,
63 const std::vector<double>& tot_chg,
64 const std::vector<std::vector<double>>& atom_chg,
65 std::map<std::vector<int>, double> orb_chg,
66 std::ofstream& os);
68 void set_nspin(int nspin_in);
70 void set_ParaV(Parallel_Orbitals* ParaV_in);
72 void collect_MW(ModuleBase::matrix& MecMulP, const ModuleBase::ComplexMatrix& mud, int nw, int isk);
75
76 private:
77 /******************************************************************
78 * private variables
79 *******************************************************************/
84 const std::vector<int>& isk_;
85 int nspin_;
87};
88
89template <typename TK>
91 hamilt::Hamilt<TK>* p_ham,
92 K_Vectors& kv,
93 elecstate::DensityMatrix<TK,double>* dm, // mohan add 2025-11-04
94 const TwoCenterBundle& two_center_bundle,
95 const LCAO_Orbitals& orb,
96 UnitCell& ucell,
97 const Grid_Driver& gd,
98 const int istep,
99 const bool print)
100{
101 // 1) calculate and output Mulliken population charges and magnetic moments
102 if (PARAM.inp.out_mul)
103 {
104 auto cell_index
106 auto out_s_k = ModuleIO::Output_Sk<TK>(p_ham, pv, PARAM.inp.nspin, kv.get_nks());
107 auto out_dm_k = ModuleIO::Output_DMK<TK>(dm, pv, PARAM.inp.nspin, kv.get_nks());
108
109 auto mulp = ModuleIO::Output_Mulliken<TK>(&(out_s_k), &(out_dm_k), pv, &cell_index, kv.isk, PARAM.inp.nspin);
110 auto atom_chg = mulp.get_atom_chg();
112 ucell.atom_mulliken = mulp.get_atom_mulliken(atom_chg);
113 if (print && GlobalV::MY_RANK == 0)
114 {
116 cell_index.write_orb_info(PARAM.globalv.global_out_dir);
118 mulp.write(istep, PARAM.globalv.global_out_dir);
120 mulp.print_atom_mag(atom_chg, GlobalV::ofs_running);
121 }
122 }
123 // 2) calculate and output the magnetizations of each atom with projection method
124 if (PARAM.inp.onsite_radius > 0)
125 {
126 std::vector<std::vector<double>> atom_mag(ucell.nat, std::vector<double>(PARAM.inp.nspin, 0.0));
127 std::vector<ModuleBase::Vector3<int>> constrain(ucell.nat, ModuleBase::Vector3<int>(1, 1, 1));
129 std::vector<double> moments;
130 std::vector<double> mag_x(ucell.nat, 0.0);
131 std::vector<double> mag_y(ucell.nat, 0.0);
132 std::vector<double> mag_z(ucell.nat, 0.0);
133 auto atomLabels = ucell.get_atomLabels();
134 if(PARAM.inp.nspin == 2)
135 {
136 auto sc_lambda
138 kv.kvec_d,
139 dynamic_cast<hamilt::HamiltLCAO<TK, double>*>(p_ham)->getHR(),
140 ucell,
141 &gd,
142 two_center_bundle.overlap_orb_onsite.get(),
143 orb.cutoffs());
144 dm->switch_dmr(2);
145 moments = sc_lambda->cal_moment(dmr, constrain);
146 dm->switch_dmr(0);
147 delete sc_lambda;
148 //const std::vector<std::string> title = {"Total Magnetism (uB)", ""};
149 //const std::vector<std::string> fmts = {"%-26s", "%20.10f"};
150 //FmtTable table(title, ucell.nat, fmts, {FmtTable::Align::RIGHT, FmtTable::Align::LEFT});
151 for(int iat=0;iat<ucell.nat;iat++)
152 {
153 atom_mag[iat][0] = 0.0;
154 atom_mag[iat][1] = moments[iat];
155 // mag_z[iat] = moments[iat];
156 }
157 //table << atomLabels << mag_z;
158 //GlobalV::ofs_running << table.str() << std::endl;
159 }
160 else if(PARAM.inp.nspin == 4)
161 {
162 auto sc_lambda = new hamilt::DeltaSpin<hamilt::OperatorLCAO<std::complex<double>, std::complex<double>>>(
163 nullptr,
164 kv.kvec_d,
165 dynamic_cast<hamilt::HamiltLCAO<std::complex<double>, std::complex<double>>*>(p_ham)->getHR(),
166 ucell,
167 &gd,
168 two_center_bundle.overlap_orb_onsite.get(),
169 orb.cutoffs());
170 moments = sc_lambda->cal_moment(dmr, constrain);
171 delete sc_lambda;
172 //const std::vector<std::string> title = {"Total Magnetism (uB)", "", "", ""};
173 //const std::vector<std::string> fmts = {"%-26s", "%20.10f", "%20.10f", "%20.10f"};
174 //FmtTable table(title, ucell.nat, fmts, {FmtTable::Align::RIGHT, FmtTable::Align::LEFT});
175 for(int iat=0;iat<ucell.nat;iat++)
176 {
177 atom_mag[iat][0] = 0.0;
178 atom_mag[iat][1] = moments[iat*3];
179 atom_mag[iat][2] = moments[iat*3+1];
180 atom_mag[iat][3] = moments[iat*3+2];
181 //mag_x[iat] = moments[iat*3];
182 //mag_y[iat] = moments[iat*3+1];
183 //mag_z[iat] = moments[iat*3+2];
184 }
185 //table << atomLabels << mag_x << mag_y << mag_z;
186 //GlobalV::ofs_running << table.str() << std::endl;
187 }
188 ucell.atom_mulliken = atom_mag;
189 }
190}
191
192} // namespace ModuleIO
193
194#endif // OUTPUT_MULLIKEN_H
This class is used to get the information of the atoms and orbitals indices in the unit cell.
Definition cell_index.h:21
Definition sltk_grid_driver.h:43
Definition klist.h:13
int get_nks() const
Definition klist.h:68
std::vector< ModuleBase::Vector3< double > > kvec_d
Cartesian coordinates of k points.
Definition klist.h:16
std::vector< int > isk
ngk, number of plane waves for each k point
Definition klist.h:21
Definition ORB_read.h:19
std::vector< double > cutoffs() const
Definition ORB_read.cpp:40
Definition complexmatrix.h:14
3 elements vector
Definition vector3.h:22
Definition matrix.h:19
Definition output_dmk.h:11
the output interface to write the Mulliken population charges
Definition output_mulliken.h:23
CellIndex * cell_index_
Definition output_mulliken.h:83
std::vector< double > get_tot_chg()
get total charge
Definition output_mulliken.cpp:305
void print_atom_mag(const std::vector< std::vector< double > > &atom_chg, std::ostream &os)
print atom mag to running log file
Definition output_mulliken.cpp:432
void set_ParaV(Parallel_Orbitals *ParaV_in)
set orbital parallel info
Definition output_mulliken.cpp:294
std::vector< std::vector< double > > get_atom_chg()
get atom charge
Definition output_mulliken.cpp:321
int nspin_
Definition output_mulliken.h:85
const std::vector< int > & isk_
Definition output_mulliken.h:84
Output_DMK< TK > * output_dmk_
Definition output_mulliken.h:81
void write_mulliken_nspin2(int istep, const std::vector< double > &tot_chg, const std::vector< std::vector< double > > &atom_chg, std::map< std::vector< int >, double > orb_chg, std::ofstream &os)
write mulliken.txt for the case of nspin=2
Definition output_mulliken.cpp:128
std::map< std::vector< int >, double > get_orb_chg()
get orbital charge
Definition output_mulliken.cpp:342
Output_Sk< TK > * output_sk_
Definition output_mulliken.h:80
void write_mulliken_nspin1(int istep, const std::vector< double > &tot_chg, const std::vector< std::vector< double > > &atom_chg, std::map< std::vector< int >, double > orb_chg, std::ofstream &os)
write mulliken.txt for the case of nspin=1
Definition output_mulliken.cpp:65
void collect_MW(ModuleBase::matrix &MecMulP, const ModuleBase::ComplexMatrix &mud, int nw, int isk)
collect_mw from matrix multiplication result
Definition output_mulliken.cpp:371
void write_mulliken_nspin4(int istep, const std::vector< double > &tot_chg, const std::vector< std::vector< double > > &atom_chg, std::map< std::vector< int >, double > orb_chg, std::ofstream &os)
write mulliken.txt for the case of nspin=4
Definition output_mulliken.cpp:208
Parallel_Orbitals * ParaV_
Definition output_mulliken.h:82
std::vector< std::vector< double > > get_atom_mulliken(std::vector< std::vector< double > > &atom_chg)
returun atom_mulliken for updateing STRU file
Definition output_mulliken.cpp:502
void set_nspin(int nspin_in)
set nspin
Definition output_mulliken.cpp:283
void write(int istep, std::string out_dir)
the outer interface to write the Mulliken population charges
Definition output_mulliken.cpp:29
void cal_orbMulP()
mulliken population = trace(dm*overlap)
ModuleBase::matrix orbMulP_
Definition output_mulliken.h:86
Definition output_sk.h:12
Definition parallel_orbitals.h:9
const Input_para & inp
Definition parameter.h:26
const System_para & globalv
Definition parameter.h:30
Definition two_center_bundle.h:11
std::unique_ptr< TwoCenterIntegrator > overlap_orb_onsite
Definition two_center_bundle.h:46
Definition unitcell.h:17
std::vector< int > get_atomCounts() const
get atomCounts, which is a vector of element type with atom number
Definition unitcell.cpp:122
std::vector< std::string > get_atomLabels() const
get atom labels
Definition unitcell.cpp:114
std::vector< std::vector< double > > atom_mulliken
Definition unitcell.h:24
int & nat
Definition unitcell.h:48
std::vector< std::vector< int > > get_lnchiCounts() const
get lnchiCounts, which is a vector of element type with the l:nchi vector
Definition unitcell.cpp:130
Definition density_matrix.h:36
hamilt::HContainer< TR > * get_DMR_pointer(const int ispin) const
get pointer of DMR
Definition density_matrix_io.cpp:186
void switch_dmr(const int mode)
(Only nspin=2) switch DMR to total density matrix or magnetization density matrix
Definition density_matrix.cpp:563
Definition dspin_lcao.h:20
Definition hcontainer.h:144
Definition hamilt_lcao.h:32
Definition hamilt.h:16
a new formatter library for formatting data
int MY_RANK
global index of process
Definition global_variable.cpp:21
std::ofstream ofs_running
Definition global_variable.cpp:38
Definition cal_dos.h:9
void cal_mag(Parallel_Orbitals *pv, hamilt::Hamilt< TK > *p_ham, K_Vectors &kv, elecstate::DensityMatrix< TK, double > *dm, const TwoCenterBundle &two_center_bundle, const LCAO_Orbitals &orb, UnitCell &ucell, const Grid_Driver &gd, const int istep, const bool print)
Definition output_mulliken.h:90
Parameter PARAM
Definition parameter.cpp:3
bool out_mul
qifeng add 2019-9-10
Definition input_parameter.h:377
double onsite_radius
radius of the sphere for onsite projection (Bohr)
Definition input_parameter.h:564
int nspin
LDA ; LSDA ; non-linear spin.
Definition input_parameter.h:85
std::string global_out_dir
global output directory
Definition system_parameter.h:42