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ReacNetGenerator ReacNetGenerator

ReacNetGenerator

  • GitHub
  • Paper
  • User Guide
    • Installation
    • Supported trajectory formats
    • Analysis
    • Generated files
    • GUI version
    • FAQ
    • Build ReacNetGenerator
    • Enable HMM filter
    • Command line interface
    • Python interface
  • Examples
    • Tutorial: Installation
    • Tutorial: Analysis
    • Simulation of the oxidation of methane
    • The thermal decomposition of CL-20 (C6H6N12O12)
    • Publications driven by ReacNetGenerator
  • Development
    • Python API
      • reacnetgenerator package
  • More
    • References
    • ReacNetGenerator paper
    • Accepted manuscript
    • GitHub
    • Research group
    • Jinzhe Zeng
  • .rst

Examples

Examples#

Tutorials

  • Tutorial: Installation
    • Install ReacNetGenerator
  • Tutorial: Analysis

Case Studies

  • Simulation of the oxidation of methane
    • Step 1: Preparing the reference dataset
    • Step 2. Training the Deep Potential (DP)
    • Step 3: Freeze the model
    • Step 4: Running MD simulation based on the DP
    • Step 5: Analysis of the trajectory
    • Acknowledge
  • The thermal decomposition of CL-20 (C6H6N12O12)
    • DP-GEN workflow
    • Analysis by ReacNetGenerator

Publications

  • Publications driven by ReacNetGenerator

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Python interface

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Tutorial: Installation

By Jinzhe Zeng

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