NeighborSearch Class Reference

#include <neighbor_search.h>

Collaboration diagram for NeighborSearch:

Public Member Functions
	NeighborSearch ()=default
	~NeighborSearch ()=default
void	init (const IAtomProvider &ucell, double sr, int mpi_rank)
void	build_neighbors ()
InputAtoms	ucell_to_input_atoms (const IAtomProvider &ucell)
void	Check_Expand_Condition (const IAtomProvider &ucell)
void	setMemberVariables (const IAtomProvider &ucell)
NeighborList &	get_neighbor_list ()
double	distance (double position_x, double position_y, double position_z, double x_low, double y_low, double z_low)
void	decompose (int mpi_size, int &nx, int &ny, int &nz)

Public Attributes
double	search_radius
int	x
int	y
int	z
double	wide_x
double	wide_y
double	wide_z
int	glayerX
int	glayerY
int	glayerZ
int	glayerX_minus
int	glayerY_minus
int	glayerZ_minus
std::vector< NeighborAtom >	all_atoms
std::vector< NeighborAtom >	inside_atoms
std::vector< NeighborAtom >	ghost_atoms
NeighborList	neighbor_list
BinManager	bin_manager

Constructor & Destructor Documentation

NeighborSearch()

NeighborSearch::NeighborSearch ( )

default

~NeighborSearch()

NeighborSearch::~NeighborSearch ( )

default

Member Function Documentation

build_neighbors()

void NeighborSearch::build_neighbors

(

)

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Check_Expand_Condition()

void NeighborSearch::Check_Expand_Condition

(

const IAtomProvider &

ucell

)

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decompose()

void NeighborSearch::decompose	(	int	mpi_size,
		int &	nx,
		int &	ny,
		int &	nz
	)

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distance()

double NeighborSearch::distance	(	double	position_x,
		double	position_y,
		double	position_z,
		double	x_low,
		double	y_low,
		double	z_low
	)

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get_neighbor_list()

NeighborList & NeighborSearch::get_neighbor_list ( )

inline

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init()

void NeighborSearch::init	(	const IAtomProvider &	ucell,
		double	sr,
		int	mpi_rank
	)

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setMemberVariables()

void NeighborSearch::setMemberVariables

(

const IAtomProvider &

ucell

)

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ucell_to_input_atoms()

InputAtoms NeighborSearch::ucell_to_input_atoms

(

const IAtomProvider &

ucell

)

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Member Data Documentation

all_atoms

std::vector<NeighborAtom> NeighborSearch::all_atoms

bin_manager

BinManager NeighborSearch::bin_manager

ghost_atoms

std::vector<NeighborAtom> NeighborSearch::ghost_atoms

glayerX

int NeighborSearch::glayerX

glayerX_minus

int NeighborSearch::glayerX_minus

glayerY

int NeighborSearch::glayerY

glayerY_minus

int NeighborSearch::glayerY_minus

glayerZ

int NeighborSearch::glayerZ

glayerZ_minus

int NeighborSearch::glayerZ_minus

inside_atoms

std::vector<NeighborAtom> NeighborSearch::inside_atoms

neighbor_list

NeighborList NeighborSearch::neighbor_list

search_radius

double NeighborSearch::search_radius

wide_x

double NeighborSearch::wide_x

wide_y

double NeighborSearch::wide_y

wide_z

double NeighborSearch::wide_z

x

int NeighborSearch::x

y

int NeighborSearch::y

z

int NeighborSearch::z

---

The documentation for this class was generated from the following files:

• /home/runner/work/abacus-develop/abacus-develop/source/source_cell/module_neighlist/neighbor_search.h
• /home/runner/work/abacus-develop/abacus-develop/source/source_cell/module_neighlist/neighbor_search.cpp